BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030D08LP1|AL429216
(915 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1710 0.0
>3x_Contig1604
Length = 15703
Score = 1710 bits (857), Expect = 0.0
Identities = 899/916 (98%), Gaps = 3/916 (0%)
Strand = Plus / Plus
Query: 1 gcaccgatgacatatgca-tgatgaaaaatttccaagtaaaaggatgggtatttcttaag 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 7543 gcaccgatgacatatgcaatgatgaaaaatttccaagtaaaaggatgggtatttcttaag 7602
Query: 60 ttataggaaagcgataactgaagcgacacaacaccaatgataatccatttagtcaaaggt 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7603 taataggaaagcgataactgaagcgacacaacaccaatgataatccatttagtcaaaggt 7662
Query: 120 tcgtggcccataagtcgctgcacttctggatgtttcttaattatggcatgtcttcttata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7663 tcgtggcccataagtcgctgcacttctggatgtttcttaattatggcatgtcttcttata 7722
Query: 180 gcatggggttctttatgtgcggaccagtagaagttatcaagaactttaaaatcctcatct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7723 gcatggggttctttatgtgcggaccagtagaagttatcaagaactttaaaatcctcatct 7782
Query: 240 gcmcttggaacgtcgacaaatttctcagagactttcaaatctctatgaacaattgtcatg 299
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7783 gcacttggaacgtcgacaaatttctcagagactttcaaatctctatgaacaattgtcatg 7842
Query: 300 tctaagggtcttaatgaagctctcttcttgttaagatagcgattccgatgctatatcaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7843 tctaagggtcttaatgaagctctcttcttgttaagatagcgattccgatgctatatcaaa 7902
Query: 360 acttgaaagthaaacaatgccgataaaaaaacaggaaccggaaacacgcttgacaaaaat 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7903 acttgaaagtaaaacaatgccgataaaaaaacaggaaccggaaacacgcttgacaaaaat 7962
Query: 420 acagttcttgatccttgattccaagcctgcctagaatcttattattgattttgatactga 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7963 acagttcttgatccttgattccaagcctgcctagaatcttattattgagtttgatactga 8022
Query: 480 tattctcaatgtaaccacaccagttggatcaggtataaatcctatgtttatgcgtgacta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8023 tattctcaatgtaaccacaccagttggatcaggtataaatcctatgtttatgcgtgacta 8082
Query: 540 tttaamagaacttaagcttttaaaatttaamatctaaaatccttaaatcccgaaamagaa 599
||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 8083 tttaaaagaacttaagcttttaaaatttaaaatctaaaatccttaaatcccgaaaaagaa 8142
Query: 600 ctgatcttatgatgtgataaattcaaacacatacacaaacctaaacgcaagcmaagcctg 659
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 8143 ctgatcttatgatgtgataaattcaaacacatacacaaacctaaacgcaagcaaagcctg 8202
Query: 660 cyaagaaatgtggtttatacttagaaagaaatctgtaattggaattacaatatatcttta 719
| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 8203 ctaagacatgtggtttatacttagaaagacatctgtaattggaattacaatatatcttta 8262
Query: 720 aacgaacaaaaaccatgcgatgagatgttgctgttccgtgtgcyctcgagcgatagaaag 779
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 8263 aacgaacaaaaaccatgcgatgagatgttgctgttccgtgtgctctcgagcgatagaaag 8322
Query: 780 aaatttttcattacgctttaagggaaatgggaaaaagtacggtcacgtgaaaaaaagaca 839
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 8323 aaatttttcattacgctttaagggaaatgggaaaaagtacggtcacgtgaaacaaagaca 8382
Query: 840 cagagagggaacgccctgttctaacatcagacacagggttggtggtacca--gggcccac 897
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 8383 cagagagggaacgccctgttctaacatcagacacagggttggtggtaccaagggccccac 8442
Query: 898 caatatctgtttaacc 913
||||||||||||||||
Sbjct: 8443 caatatctgtttaacc 8458
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7187
Number of Sequences: 1807
Number of extensions: 7187
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)